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Full Time Faculty Master of Philosophy (MPhil) in Organic Chemistry, BUET |
Dr. Mohammed Kabir Uddin is currently an Assistant Professor in the Department of Biochemistry & Microbiology at North South University in Dhaka, Bangladesh. He holds a Ph.D. in Bioinorganic Chemistry from Murdoch University in Perth, Australia, an MS in Computational Biochemistry from the Memorial University of Newfoundland in Canada, an MPhil in Organic Chemistry from Bangladesh University of Engineering & Technology (BUET), and an MSc with a thesis centered on Organic Chemistry from the University of Chittagong (CU), Bangladesh. His research encompasses a range of fields, including organic synthesis, bioinorganic chemistry, computational chemistry, medicinal chemistry, and drug discovery. Throughout his academic journey, Dr. Uddin has garnered recognition through numerous awards, scholarships, and fellowships, underscoring his commitment and contributions. He maintains active engagement with esteemed professional organizations such as the American Chemical Society (ACS), the Royal Australian Chemical Institute (RACI), the Chemical Institute of Canada (CIC), and the Bangladesh Chemical Society (BCS). His research findings have been published in reputable scientific journals including ACS, Wiley, Elsevier, and Springer.
Outside academia, Dr. Uddin's influence extends to various industries. He has worked as a Consultant at The Feel Great Challenge Company in Western Australia and held the role of a Research Assistant at the Memorial University of Newfoundland in Canada. His industrial involvements encompass roles such as Quality Control Executive at Incepta Pharmaceutical Ltd. and Research and Development Chemist at The ACME Laboratories Ltd., both located in Bangladesh.
Publications in the International referred Journals
NSU:
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1 |
Karim, T., Almatarneh, M. H., Rahman, S., Alodhayb, A. N., Albrithen, H., Hossain, M. M., and Kabir M. Uddin. In Silico Prediction of Antibacterial Activity of Quinolone Derivatives. ChemistrySelect, 2024, 9(36), e202402780. |
SCOPUS PubMed |
Q-3 |
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2 |
Hossain, M. S., Sakib, M., Rahman, S., Al‐Gawati, M. A., Alodhayb, A. N., Albrithen, H., and Kabir M. Uddin. Simulating New Fusidic Acid Derivatives to Target Gram‐Positive Bacteria by Using Computational Methods. ChemistrySelect, 2024, 9(44), e202404142. |
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3 |
Suha, H. N., Tasnim, S. A., Rahman, S., Alodhayb, A., Albrithen, H., Poirier, R. A., and Kabir M. Uddin. Evaluating the Anticancer Properties of Novel Piscidinol A Derivatives: Insights from DFT, Molecular Docking, and Molecular Dynamics Studies. ACS omega, 2024, 9(50), 49639-49661. |
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4 |
Mansour H. Almatarneh*, Enas K. Ibrahim, Ahmad M. Alqaisi, Ghada G. Kayed, Joshua W. Hollett, Kabir M. Uddin, Yuming Zhao. Jordan Journal Chemistry. Molecular Dynamics Simulations of HLA-CW4-β2M-KIR2DL1 Protein Complex with Peptide QYDDAVYKL. JJCs35-05-024 (Accepted) |
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5 |
Akter, S., Kawsar, S.M., Bouzid, G., Horchani, M., Bulbul, M.Z., Ghalla, H., Jannet, H.B., Saha, S., Fujii, Y., Kabir M. Uddin and Bhat, A.R., Synthesis, Antimicrobial Activity, DFT, Molecular Docking, and Dynamic Simulations of Trityl Mannopyranoside Derivatives for Potential Antibacterial Agents. Medicinal chemistry (Shariqah (United Arab Emirates)). 2024 https://doi.org/10.2174/0115734064339243241027024304 |
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6 |
Saif, Minhaz Zabin, Nusrat Jahan Ikbal Esha, Syeda Tasnim Quayum, Shofiur Rahman, Mahmoud Al-Gawati, Ghadah Alsowygh, Hamad Albrithen, Abdullah Alodhayb, Raymond A. Poirier, and Kabir M. Uddin. Investigating the potential of 6-substituted 3-formyl chromone derivatives as anti-diabetic agents using in silico methods. Sci Rep 14, 2024, 13221. https://doi.org/10.1038/s41598-024-63237-y |
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7 |
Suha, H.N., Hossain, M.S., Rahman, S., Alodhayb, A., Hossain, M.M., Kawsar, S.M., Poirier, R. and Uddin, K.M. In Silico Discovery and Predictive Modeling of Novel Acetylcholinesterase (AChE) Inhibitors for Alzheimer's Treatment. Medicinal Chemistry (Shariqah (United Arab Emirates)). 2024 May. https://doi.org/10.2174/0115734064304100240511112619 |
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8 |
Meem, M. H., Yusuf, S. B., Al Abbad, S. S., Rahman, S., Al-Gawati, M., Albrithen, H. & Uddin, K. M. Exploring the anticancer and antibacterial potential of naphthoquinone derivatives: a comprehensive computational investigation. Frontiers in Chemistry, 2024, 12, 1351669. https://doi.org/10.3389/fchem.2024.1351669 |
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9 |
Hossain, M. S., Al Abbad, S. S., Alsunaidi, Z. H., Rahman, S., Alodhayb, A. N., Hossain, M. M. & Uddin, K. M. Evaluation of novel pyridoxal isonicotinoyl hydrazone (PIH) derivatives as potential anti‐tuberculosis agents: An in silico investigation. International Journal of Quantum Chemistry, 2024,124(9), e27381. https://doi.org/10.1002/qua.27381
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10 |
Quayum, S.T., Esha, N.J.I., Siraji, S., Al Abbad, S.S., Alsunaidi, Z.H., Almatarneh, M.H., Rahman, S., Alodhayb, A.N., Alibrahim, K.A., Kawsar, S.M. and Uddin, K.M. Exploring the effectiveness of flavone derivatives for treating liver diseases: Utilizing DFT, molecular docking, and molecular dynamics techniques. MethodsX, 2024, 12, 102537. https://doi.org/10.1016/j.mex.2023.102537 |
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11 |
Uddin, K.M., Meem, M.H., Akter, M., Rahman, S., Al-Gawati, M.A., Alarifi, N., Albrithen, H., Alodhayb, A., Poirier, R.A. and Bhuiyan, M.M.H. Design, synthesis, and bioevaluation of novel unsaturated cyanoacetamide derivatives: In vitro and in silico exploration. MethodsX, 2024, 12, 102691. https://doi.org/10.1016/j.mex.2024.102691 |
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12 |
Rahman, A., Akter, S., Sadique, A., Alam, J., Asrafie, S., Tabassum, A., Hossain, S.A., Rahman, M.M., Billah, M.B., Huq, T.S. and Uddin, K.M. Whole genome sequence of denitrifying bacterium Stutzerimonas stutzeri strain NGHE31, collected from an eutrophic wetland in Sunamganj, Bangladesh, following the 2017 flash floods. Microbiology Resource Announcements, 2024, e00001-24. https://doi.org/10.1128/mra.00001-24 |
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13 |
Labiba, A., Al Abbad, S.S., Rahman, S., Alodhayb, A., Poirier, R.A. and Uddin, K.M. Investigating Baxdrostat and Its Derivatives as Aldosterone Synthase Inhibitors for Resistant Hypertension: An In Silico Approach. ChemistrySelect, 2024, 9(7), p.e202304929. https://doi.org/10.1002/slct.202304929 |
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14 |
Akter, N., Bourougaa, L., Ouassaf, M., Bhowmic, R. C., Uddin, K. M., Bhat, A. R., & Kawsar, S. M. Molecular docking, ADME-Tox, DFT and molecular dynamics simulation of butyroyl glucopyranoside derivatives against DNA gyrase inhibitors as antimicrobial agents. Journal of Molecular Structure, 2024, 1307, 137930. https://doi.org/10.1016/j.molstruc.2024.137930 |
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15 |
Zaman, B., Mostafa, I., Hassan, T., Ahmed, S., Esha, N. J. I., Chowdhury, F. A., Uddin, K. M & Rahman, M. Tolperisone hydrochloride improves motor functions in Parkinson’s disease via MMP-9 inhibition and by downregulating p38 MAPK and ERK1/2 signaling cascade. Biomedicine & Pharmacotherapy, 2024, 174, 116438. https://doi.org/10.1016/j.biopha.2024.116438 |
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16 |
Esha, N.J.I., Quayum, S.T., Saif, M.Z., Almatarneh, M.H., Rahman, S., Alodhayb, A., Poirier, R.A. and Uddin, K.M. Exploring the potential of fluoro-flavonoid derivatives as anti-lung cancer agents: DFT, molecular docking, and molecular dynamics techniques. Int J Quantum Chem. 2023; e27274. https://doi.org/10.1002/qua.27274 |
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17 |
Uddin, K. M., Sakib, M., Siraji, S., Uddin, R., Rahman, S., Alodhayb, A., & Bhuiyan, M. M. H. Synthesis of new derivatives of benzylidinemalononitrile and ethyl 2-cyano-3-phenylacrylate: in silico anticancer evaluation. ACS omega,2023, 8(29), 25817-25831. https://doi.org/10.1021/acsomega.3c01123 |
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18 |
Uddin, K.M., Islam, M.S., Islam, S.M. and Poirier, R.A. New insight into the substituent effects on the hydrolytic deamination of saturated and unsaturated cytosine. International Journal of Quantum Chemistry, 2023, 123(2), p.e27014. https://doi.org/10.1002/qua.27014 |
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19
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Uddin, Kabir M., Mohammed A. Hosen, Mohammad F. Khan, Yasuhiro Ozeki, and Sarkar Kawsar. "Investigation of Structural, Physicochemical, Pharmacokinetics, PASS Prediction, and Molecular Docking Analysis of Methyl 6-O-Myristoyl-α-D-Glucopyranoside Derivatives against SARS-CoV-2." Philippine Journal of Science 151 (2022). |
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Before NSU:
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20 |
Uddin, Kabir M., Md Saiful Islam, Shahidul M. Islam, and Raymond A. Poirier. "New insight into the substituent effects on the hydrolytic deamination of saturated and unsaturated cytosine." International Journal of Quantum Chemistry, 2023, 123 (2): e27014. https://doi.org/10.1002/qua.27014 |
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Q-3 |
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21 |
Uddin, K. M., Hosen, M. A., Khan, M. F., Ozeki, Y., & Kawsar, S. Investigation of Structural, Physicochemical, Pharmacokinetics, PASS Prediction, and Molecular Docking Analysis of Methyl 6-O-Myristoyl-α-D-Glucopyranoside Derivatives against SARS-CoV-2. Philippine Journal of Science, 2022, 151, 2215-2231. https://philjournalsci.dost.gov.ph/images/pdf/pjs_pdf/vol151no6A/investigation_of_structural_physicochemical_pharmacokinetics_PASS_prediction_.pdf |
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Q-3 |
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22 |
Uddin, K. M.; Alrawashdeh, A. I.; Henry, D. J.,Warburton, P. L. Poirier, R. A. Hydrolytic Deamination Reactions of Amidine and Nucleobase Derivatives. Int. J. Quantum Chem. 2020, 120(1), e26059. DOI: http://dx.doi.org/10.3329/jsr.v13i1.48147. |
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23 |
Uddin, K. M.; Alrawashdeh, A. I.; Debnath, T.; Aziz, M. A.; Poirier, R. A. Synthesis, spectroscopic characterization, and theoretical studies on the substitution reaction of chromium(III) picolinate. J. Mol. Struct. 2019, 1189, 28−39A. DOI: https://doi.org/10.1016/j.molstruc.2019.04.015. |
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24 |
Kabir, H.; Rahman, M. M.; Uddin, K. M. Structural, Morphological, Compositional and Optical Studies of Plasma Polymerized 2-Furaldehyde. Appl. Surf. Sci. 2017, 423, 983−994. DOI: https://doi.org/10.1016/j.apsusc.2017.06.284. |
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25 |
Uddin, K.M.; Henry, D. J., Alrawashdeh, I. A.; Warburton, P. L.; Poirier, R.A. Mechanism for the deamination of Ammeline, Guanine and their Analogues. Struct Chem. 2017, 28, 1467 —1477. DOI: https://doi.org/10.1007/s11224-017-0941-z. |
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26 |
Uddin, K.M.; Henry, D. J. Investigation of Mono-, Bis- and Tris-glycinatochromium(III): Comparisons of Computational and Experimental Results. Polyhedron 2017, 130, 81−93. |
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27 |
Uddin, K.M.; Habib, A. M.; Henry, D. J. Investigating the thermal analysis and Electrochemistry properties for tris-(glycinato)chromium(III). ChemistrySelect 2017, 2, 1950−1958. |
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28 |
Uddin, K. M.; Henry, D. J. Further Theoretical Studies of the Aquation of Chromium(III) Chloride Nutritional Supplement: Effect of pH and Solvation. ChemistrySelect 2016, 1, 5236−5249. DOI: https://doi.org/10.1002/slct.201601305.
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29 |
Uddin, K. M.; Henry, D. J. Poirier, R. A.; Warburton, P. L. Calculated Bond Dissociation Energies and Enthalpy of Formation of alpha-Amino acid Radicals. Theor. Chem. Acc. 2016, 135, 224. DOI: https://doi.org/10.1007/s00214-016-1975-9.
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30 |
Almatarneh, M. H.; Abu-Saleh, A. A. A.; Uddin, K. M.; Poirier, R. A.; Warburton, P. L. A Computational Mechanistic Study of the Deamination Reaction of Melamine. Int. J. Quantum Chem. 2016, 117, 180−189. DOI: https://doi.org/10.1002/qua.25308
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31 |
Uddin, K.M.; Raymond, A. Poirier; Henry, D. J.; Mechanistic study of the aquation of nutritional supplement. chromium chloride and other chromium(III) Dihalides. J. Comp. and theor. Chem. 2016, 1084, 88−97. DOI: https://doi.org/10.1016/j.comptc.2016.03.016 |
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32 |
Uddin, K.M.; Ralph, D.; Henry, D. J. Mechanistic investigation of halopentaaquachromium(III) complexes: comparison of computational and experimental results. J. Comp. and theor. Chem. 2015, 1070, 152−161. DOI: https://doi.org/10.1016/j.comptc.2015.08.007. |
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33 |
Uddin, K.M.; Flinn, C. G.; Poirier, R.A.; Warburton, P. L. Comparative computational investigation of the reaction mechanism for the hydrolytic deamination of cytosine, cytosine cyclobutane dimer and several 5,6-saturated. J. Comp. and theor. Chem. 2014, 1027, 91−102. DOI: https://doi.org/10.1016/j.comptc.2013.10.027. |
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34 |
Khan, M. W.; Uddin, K.M.; Ali, M.; Rahman, M. S.; Rashid, M. A.; Chowdhury, R. A convenient synthesis of new annelated pyrimidines and their biological importance. J. Heterocycl. Chem. 2014, 51, E216−E221. DOI: https://doi.org/10.1002/jhet.1891. |
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35 |
Uddin, K.M.; Warburton, P. L; Poirier, R.A. Comparative computational and experimental thermochemical properties of common α-amino acids. J. Phys. Chem. B 2012, 116, 3220−34. DOI: https://doi.org/10.1021/jp210948m. |
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36 |
Uddin, K.M.; Poirier, R.A. Computational study of the deamination of 8-Oxoguanine. J. Phys. Chem. B 2011, 115, 9151−9159. DOI: https://doi.org/10.1021/jp202098k. |
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37
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37. Uddin, K.M.; Almatarneh, M.H.; Shaw, D.M.; Poirier, R.A. Mechanistic study of the deamination reaction of guanine: A computational study. J. Phys. Chem. A 2011, 115, 2065−2076. DOI: https://doi.org/10.1021/jp1120806.
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38 |
Rahman, K. M.; Chowdhury, A. Z. M.S.; Bhuiyan, M. M. H.; Hossain, M. K.; Uddin, K.M. Synthesis and antimicrobial activity of some heterocycles: Part- II Pak J. Sci. Ind. Res. 2003, 46, 95−98. DOI: http://www.v2.pjsir.org/index.php/biological-sciences/article/ view/1601.
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39 |
Rahman, K. M.; Chowdhury, A. Z. M.S.; Bhuiyan, M. M. H.; Hossain, M. K.; Uddin, K.M. Synthesis and antimicrobial activity of some Heterocycles: Part – II. North Ben. Uni. Rev. (Sci. & Tec,) 2001, 12, 1−12. |
International |
Not index |
Presentations at Scientific Meetings and Conferences
NSU:
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Full Citation |
International/Local Conference |
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01 |
New insight mechanistic exploration of methyl substitution effects on picolinic acid decarboxylation pathways. Kabir M Uddin, Raymond A. Poirier. ACS Spring 2024 Conference on New Orleans, Louisiana & Hybrid, March 17 - 21, 2024 |
International |
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02 |
Investigating hydrazine derivatives as prospective anticancer agents: Evaluation of physicochemical properties, molecular docking, and dynamic analysis. Mohiuddin Sakib, Md. Shamim Hossian, and Kabir M Uddin. 37th BSM Annual Conference, 26-27 Jan. 2024. |
Local |
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03 |
In- silico evaluation of novel pyridoxal isonicotinoyl hydrazone (PIH) derivatives as anti-tuberculosis agents. Md. Shamim Hossian, Mohiuddin Sakib, and Kabir M Uddin. 37th BSM Annual Conference, 26-27 Jan. 2024. |
Local |
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04 |
Investigating anti acetylcholinesterases (AChE) as potential therapies for Alzheimer’s disease through in silico analysis. Humaera Noor Suha and Kabir M Uddin. 37th BSM Annual Conference, 26-27 Jan. 2024. |
Local |
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05 |
Comprehensive exploration of physico-chemical properties, molecular docking and molecular dynamics assessment of novel naphthoquinone derivatives potential as anticancer and antibacterial agents. Mehnaz Hossain Meem, Sumaiya Binte Yusuf and Kabir M Uddin. 37th BSM Annual Conference, 26-27 Jan. 2024. |
Local |
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06 |
A comparative in silico assessment of baxdrostat and potential derivatives as aldosterone synthase inhibitors for the treatment of resistant hypertension. Atiqa Labiba and Kabir M Uddin. 37th BSM Annual Conference, 26-27 Jan. 2024. |
Local |
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07 |
Computational exploration of novel polyamine quinoline antibiotic enhancers against resistant gram-negative Pseudomonas aeruginosa bacteria. Tafsir Karim and Kabir M Uddin. 37th BSM Annual Conference, 26-27 Jan. 2024. |
Local |
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08 |
Investing small compounds for cancer therapy: Exploring properties, docking, and movement. Shairin and and Kabir M Uddin. 37th BSM Annual Conference, 26-27 Jan. 2024. |
Local |
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09 |
Molecular Docking, Molecular Dynamics Studies and Biological Evaluation of Fluoro-Flavonoid Derivatives as Potential Anti-Cell Lung Cancer. Nusrat Jahan Ikbal Esha, Mohiuddin Sakib, and Kabir M Uddin. 1st International Conference on Frontier in Science, 11-22 NOV. 2022 |
Local |
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10 |
DFT Study, Physicochemical, Molecular Docking, and Molecular Dynamics Studies of novel Hydrazone Derivatives as Ant-tuberculosis agents. Asaduzzaman, Kabir M Uddin. 1st International Conference on Frontier in Science, 11-22 NOV. 2022. |
International |
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11 |
Investigation of Thermochemical, Physiochemical, Pharmacokinetics, Molecular Docking and Molecular Dynamic Analysis of 6-substituted 3-formylchromone derivatives as Potential Anti-inflammatory and Antineoplastic Agents. Minhaz Zabin Saif, Md Emamuzzaman and Kabir M Uddin. 1st International Conference on Frontier in Science, 11-22 NOV. 2022. |
International |
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12 |
Bio-evaluation, DFT Study, Pharmacokinetics, Molecular Docking, and Molecular Dynamics Studies of Some novel Flavonoids as Potential Anti-Liver Drug. Syeda Tasnim Quayum, Kabir M Uddin. 1st International Conference on Frontier in Science, 11-22 NOV. 2022. |
International |
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13 |
Investigation of Physiochemical, Pharmaco kinetics, Molecular Docking, and Molecular Dynamics analysis of Novel Quinoline Derivatives as Potential Antimalarial Drug. Siam Siraji, Md. Abu Sayed, Md Tanim Bin Zaman, Abdullah Bin Masud, Kabir M Uddin. 1st International Conference on Frontier in Science, 11-22 NOV. 2022.
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International |
Before NSU:
Awards/Scholarships/Fellowships
PhD in Bioinorganic Chemistry, Murdoch University, Perth, Australia July 2013 – Apr 2017
Dissertation Title: Investigation of the Substitution Reaction Pathways of Antidiabetic Chromium (III) Supplements
Concentration: Investigating both experimental and computational methods
Master of Science (MS) in Computational Biochemistry, Memorial University of Newfoundland (MUN), Canada Sep 2009 – Apr 2013
CGPA: 3.50 in the scale of 4.0
Dissertation Title: Computational Study for the Reaction Mechanism of the Hydrolytic Deamination of Nucleic Acids and Derivatives of Cytosine
Master of Philosophy (MPhil) in Organic Chemistry, Bangladesh University of Engineering & Technology (BUET), Dhaka Oct 2001 – Dec 2006
CGPA: 3.17 in the scale of 4.0 (Equiv. First Class)
Dissertation Title: Synthesis of Some New Annelated Fused Heterocyclic Derivatives of Biological Importance
Master of Science in Organic Chemistry, University of Chittagong (CU), Bangladesh Dec 1998 – Jan 2001
Result: First Class (3rd Position)
Dissertation Title: Synthesis, Characterization and Antimicrobial Activity of Some New Annulated Fused Pyrimidines
Experience in Education
Assistant Professor, Department of Chemistry, CAAS, IUBAT (Oct 2020 - 7th May 2022)
Courses: CHM 117 Basic Fundamental Chemistry
CHM 115 Basic Fundamental Chemistry
CHM 118 LAB
CHM 116 LAB
Adjunct Assistant Professor (ID 6042), School of Life Sciences (SLS), Independent University, Bangladesh (IUB) (Sep 2017 - Sep 2020)
Courses: BIO 201 Organic Chemistry I
BIO 202 Organic Chemistry II
BIO 206 LAB
BIO 103 General Chemistry
BIO 103 LAB
Adjunct Assistant Professor, Department of Theoretical and Computational Chemistry, University of Dhaka, Bangladesh (Oct 2018 - Jan 2019)
Course: TCC 503
TCC 522L
Head, Department of Chemistry, Mastermind English Medium School, Bangladesh (Jan 2019 - Sep 2020)
Research Assistant (RA), Memorial University of Newfoundland, Canada (April 2013 – July 2013)
Teaching Assistant in Undergraduate Student:
Murdoch University, Perth, Western Australia (Jan 2014 – Dec 2016)
Memorial University of Newfoundland, Canada (Sep 2009 – Apr 2013)
Consultant, The Feel Great Challenge Company, Western Australia (Feb 2017 - May 2017)
Quality Control Executive, Incepta Pharmaceutical Ltd., Dhaka, Bangladesh (Apr 2005 - Aug 2009)
Research and Development Chemist, The ACME Laboratories Ltd., Dhaka, Bangladesh (Aug 2002 - Apr 2005)
Responsibilities
CHE 101 General Chemistry
CHE 101 L General Chemistry
CHE 201 Biophysical Chemistry
CHE 202 Bio-Organic Chemistry
CHE 202L Bio-Organic Chemistry
CHE 203 Chemistry of Biomolecules
CHE 203L Chemistry of Biomolecules
In my research, I delve into various branches of chemistry, with a focus on crafting, characterizing, applying, and computationally investigating chemical compounds for both medicinal drug development and biological exploration.